Faust and raes 2012
WebMay 26, 2024 · 98 predation (Faust & Raes, 2012) (Williams et al., 2014) . 99 Comparative analyses of microbial networks built from distinct datasets that vary at one or 100 multiple sample traits (either host or environmental) are particularly powerful to explore 101 microbial community dynamics (Faust et al., 2015). This type of approach can retrieve Webinteractions such as those of microorganisms (Berry & Widder, 2014a; Faust & Raes, 2012). Hypotheses for microbial interactions can be formulated on the basis of co-abundance data derived from environmental DNA metabarcoding data (i.e. the sample × taxa matrix) via statistical or machine-learning approaches (Vacher et al., 2016).
Faust and raes 2012
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WebFurther, co-occurrence studies indicate that Porphyromonas and Veillonella are both found preferentially in the presence of Streptococcus (Fig. 2.2A) (Faust & Raes, 2012). Overall, therefore, this study provides evidence that at least some of the relationships between streptococci and other bacteria in oral biofilms are driven by nutritional ... WebThe second part of Faust is much longer than the first and contains many complicated allegorical elements. Because less emphasis is usually given to Part Two in classroom …
WebApr 29, 2016 · Fecal microbiome variation in the average, healthy population has remained under-investigated. Here, we analyzed two independent, extensively phenotyped cohorts: the Belgian Flemish Gut Flora Project (FGFP; discovery cohort; N = 1106) and the Dutch LifeLines-DEEP study (LLDeep; replication; N = 1135). Integration with global data sets … WebApr 5, 2024 · In most cases, these assemblages consist of a large number of metabolically diverse genotypes that engage in a complex network of both antagonistic and synergistic …
Web60 & Raes, 2012). The interactions between microorganisms happen in a variety of ways such as the 61 flow of energy, matter, and signals leading to the formation of complex ecological networks ... Faust & Raes, 2012; Deng et al., 64 2016). In litter decomposition, the interactions between complementary microbes is required for 65 the ... http://www.cscanada.net/index.php/sll/article/view/11492
Webinfer biological interactions (Faust & Raes, 2012). In this context, network analysis has recently gained importance to examine microbial interactions and their effects on the com-munity structure and functioning (Barber an et al., 2012; Faust & Raes, 2012;Gobernaetal.,2024; Hernandez et al., 2024). However, potential artifacts and false …
Webcooperation and competition (Faust & Raes, 2012; Yu et al., 2024). Additionally, microbial networks have been highlighted as crucial to understanding the dynamics of microbial fab feedbackWebBertilsson,2012; Faust&Raes,2012). The differences in the environmental characteristics of the samples (e.g., location, season, depth) are required so that enough variation exists between samples so that relevant co-occurrence patterns can be detected. If we were to work with samples that were too homogeneous, very little variation would be ... does huffing show up on drug testsWebJun 27, 2016 · The construction and interpretation of microbial networks from sequencing data faces a number of challenges ( Faust & Raes, 2012). Since a different amount of DNA is sequenced in each sample, microbial marker gene counts have to be normalized to adjust for varying sequencing depth. fab feet hucclecoteWeb2012) or co-occurrence network (Faust & Raes, 2012). Although cor-relations between time-series data are often used as a proxy for inter-actions between species, this is not a reliable method even if a strong correlation exists between two species (Fisher & Mehta, 2014). A co- occurrence network only implies the presence of underlying ecologi- fab feet shoesWebAug 1, 2024 · Generalists are used as the keystone taxa of co-occurrence networks according to network theory (Faust & Raes, 2012). The nodes from Bacteroidetes, … does huff post lean left or rightWebDifferent computational models for deriving networks tend to give different outputs (Faust & Raes, 2012). Nevertheless, at least two different models applied to the human microbiome dataset indicate that Streptococcus on the tongue positively correlates with Veillonella and that Streptococcus throughout the oral cavity co-occurs with ... fab feet washable insole walmartWebOct 27, 2015 · from such patterns (re viewed in Faust and Raes, 2012). These techniques include simple pair-wise Pearson or Spearman correlations ( Arumugam et al., 2011 ; Barberán et al., 2012 ;i n Zhou et al., fab fellow crossword